HL_6QNR_003

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGAAACU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_003 not in the Motif Atlas

Geometric match to HL_6CZR_215

Geometric discrepancy: 0.2557

The information below is about HL_6CZR_215

Detailed Annotation

GNRA with extra near cWW

Broad Annotation

GNRA with extra near cWW

Motif group

HL_82182.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

6QNR|1|13|G|157
6QNR|1|13|G|158
6QNR|1|13|G|159
6QNR|1|13|A|160
6QNR|1|13|A|161
6QNR|1|13|A|162
6QNR|1|13|C|163
6QNR|1|13|U|164

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain B8

50S ribosomal protein L19

Chain BI

30S ribosomal protein S20