HL_6QNR_085

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

6QNR|1|14|A|2268, 6QNR|1|14|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_085 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.086

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

6QNR|1|14|C|2264
6QNR|1|14|U|2265
6QNR|1|14|A|2266
6QNR|1|14|A|2267
6QNR|1|14|A|2268
6QNR|1|14|A|2269
6QNR|1|14|G|2270
6QNR|1|14|G|2271
6QNR|1|14|U|2272
6QNR|1|14|A|2273
6QNR|1|14|A|2274
6QNR|1|14|C|2275
6QNR|1|14|G|2276

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 45

50S ribosomal protein L16

Chain E5

50S ribosomal protein L27