HL_6QNR_143

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUUGUC

Length

7 nucleotides

Bulged bases

6QNR|1|1H|U|272, 6QNR|1|1H|U|275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_143 not in the Motif Atlas

Geometric match to HL_4WRT_001

Geometric discrepancy: 0.3894

The information below is about HL_4WRT_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19413.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

6QNR|1|1H|G|270
6QNR|1|1H|C|271
6QNR|1|1H|U|272
6QNR|1|1H|U|273
6QNR|1|1H|G|274
6QNR|1|1H|U|275
6QNR|1|1H|C|276

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 61

50S ribosomal protein L9

Chain J8

50S ribosomal protein L28