HL_6QNR_168

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUCGUC

Length

7 nucleotides

Bulged bases

6QNR|1|1H|G|1372, 6QNR|1|1H|U|1376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_168 not in the Motif Atlas

Homologous match to HL_7RQB_034

Geometric discrepancy: 0.085

The information below is about HL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

6QNR|1|1H|G|1371
6QNR|1|1H|G|1372
6QNR|1|1H|U|1373
6QNR|1|1H|C|1374
6QNR|1|1H|G|1375
6QNR|1|1H|U|1376
6QNR|1|1H|C|1377

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 98

50S ribosomal protein L17

Chain E8

50S ribosomal protein L22