HL_6QNR_190

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_190 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.2925

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6QNR|1|1H|G|2316
6QNR|1|1H|G|2317
6QNR|1|1H|A|2318
6QNR|1|1H|C|2319
6QNR|1|1H|G|2320
6QNR|1|1H|G|2321
6QNR|1|1H|A|2322
6QNR|1|1H|A|2323
6QNR|1|1H|A|2324
6QNR|1|1H|U|2325
6QNR|1|1H|C|2326

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 16

5S ribosomal RNA; 5S rRNA

Chain 41

50S ribosomal protein L5