HL_6QNR_196

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

6QNR|1|1H|G|2542

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_196 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0701

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

6QNR|1|1H|U|2541
6QNR|1|1H|G|2542
6QNR|1|1H|A|2543
6QNR|1|1H|A|2544
6QNR|1|1H|G|2545
6QNR|1|1H|A|2546
6QNR|1|1H|A|2547
6QNR|1|1H|G|2548

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6