HL_6QNR_216
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAG(H2U)CGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6QNR|1|2L|C|17, 6QNR|1|2L|G|18, 6QNR|1|2L|G|19, 6QNR|1|2L|U|20
- QA status
- Modified nucleotides: H2U
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNR_216 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1053
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QNR|1|2L|C|13
6QNR|1|2L|A|14
6QNR|1|2L|G|15
6QNR|1|2L|H2U|16
6QNR|1|2L|C|17
6QNR|1|2L|G|18
6QNR|1|2L|G|19
6QNR|1|2L|U|20
6QNR|1|2L|A|21
6QNR|1|2L|G|22
Current chains
- Chain 2L
- E. coli tRNAPhe
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 49
- 50S ribosomal protein L5
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