HL_6QNR_219

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UCAGUCGGUAGA

Length

12 nucleotides

Bulged bases

6QNR|1|3K|U|16, 6QNR|1|3K|C|17, 6QNR|1|3K|G|18

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_219 not in the Motif Atlas

Homologous match to HL_4WT8_234

Geometric discrepancy: 0.4476

The information below is about HL_4WT8_234

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96927.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6QNR|1|3K|U|12
6QNR|1|3K|C|13
6QNR|1|3K|A|14
6QNR|1|3K|G|15
6QNR|1|3K|U|16
6QNR|1|3K|C|17
6QNR|1|3K|G|18
6QNR|1|3K|G|19
6QNR|1|3K|U|20
6QNR|1|3K|A|21
6QNR|1|3K|G|22
6QNR|1|3K|A|23

Current chains

Chain 3K

E. coli tRNAPhe

Nearby chains

Chain 1H

Large subunit ribosomal RNA; LSU rRNA

Chain 71

50S ribosomal protein L1