HL_6QNR_248
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- G(PSU)AAC(5MU)A(PSU)AA(OMC)
- Length
- 11 nucleotides
- Bulged bases
- 6QNR|1|1H|A|1936
- QA status
- Modified nucleotides: PSU, 5MU, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNR_248 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.4251
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6QNR|1|1H|G|1933
6QNR|1|1H|PSU|1934
6QNR|1|1H|A|1935
6QNR|1|1H|A|1936
6QNR|1|1H|C|1937
6QNR|1|1H|5MU|1938
6QNR|1|1H|A|1939
6QNR|1|1H|PSU|1940
6QNR|1|1H|A|1941
6QNR|1|1H|A|1942
6QNR|1|1H|OMC|1943
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1K
- Transfer RNA; tRNA
- Chain 2K
- Transfer RNA; tRNA
- Chain 4K
- mRNA
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