HL_6R86_079
3D structure
- PDB id
- 6R86 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1-60S ribosomal subunit complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAUUCAUUUUC
- Length
- 12 nucleotides
- Bulged bases
- 6R86|1|1|C|2539, 6R86|1|1|A|2540
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R86_079 not in the Motif Atlas
- Homologous match to HL_8P9A_163
- Geometric discrepancy: 0.4016
- The information below is about HL_8P9A_163
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23509.1
- Basepair signature
- cSH-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
6R86|1|1|G|2534
6R86|1|1|A|2535
6R86|1|1|A|2536
6R86|1|1|U|2537
6R86|1|1|U|2538
6R86|1|1|C|2539
6R86|1|1|A|2540
6R86|1|1|U|2541
6R86|1|1|U|2542
6R86|1|1|U|2543
6R86|1|1|U|2544
6R86|1|1|C|2545
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L8-A
- Chain i
- 60S ribosomal protein L34-A
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