Motif HL_23509.1 Version HL_23509.1 of this group appears in releases 3.91 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-2 | 1-11 | 3-8 | 4-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8P9A_163 | 8P9A | 0.0000 | 1 | AR | LSU rRNA | G | 2534 | A | 2535 | A | 2536 | U | 2537 | U | 2538 | A | 2540 | U | 2541 | U | 2542 | U | 2543 | U | 2544 | C | 2545 | cSH | ncWW | ntSH | ncWw |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUUCAUUUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUUCAUUUU | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cSH-F-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: