HL_6RM3_005

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

6RM3|1|L50|U|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_005 not in the Motif Atlas

Geometric match to HL_4V88_215

Geometric discrepancy: 0.2432

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6RM3|1|L50|C|205
6RM3|1|L50|U|206
6RM3|1|L50|U|207
6RM3|1|L50|A|208
6RM3|1|L50|A|209
6RM3|1|L50|U|210
6RM3|1|L50|U|211
6RM3|1|L50|G|212

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LG0

eL8

Chain LHH

uL29

Chain LJJ

eL37

Chain LN0

eL15