HL_6RM3_007

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUGGUAGUG

Length

10 nucleotides

Bulged bases

6RM3|1|L50|U|309, 6RM3|1|L50|A|310

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_007 not in the Motif Atlas

Homologous match to HL_5TBW_008

Geometric discrepancy: 0.2172

The information below is about HL_5TBW_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6RM3|1|L50|C|304
6RM3|1|L50|U|305
6RM3|1|L50|U|306
6RM3|1|L50|G|307
6RM3|1|L50|G|308
6RM3|1|L50|U|309
6RM3|1|L50|A|310
6RM3|1|L50|G|311
6RM3|1|L50|U|312
6RM3|1|L50|G|313

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LN0

eL15

Chain LOO

eL42