HL_6RM3_049

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAUCAUAG

Length

9 nucleotides

Bulged bases

6RM3|1|L50|A|2111, 6RM3|1|L50|U|2112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_049 not in the Motif Atlas

Homologous match to HL_8C3A_062

Geometric discrepancy: 0.1962

The information below is about HL_8C3A_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6RM3|1|L50|C|2109
6RM3|1|L50|G|2110
6RM3|1|L50|A|2111
6RM3|1|L50|U|2112
6RM3|1|L50|C|2113
6RM3|1|L50|A|2114
6RM3|1|L50|U|2115
6RM3|1|L50|A|2116
6RM3|1|L50|G|2117

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LI0

uL16

Chain LMM

eL40