HL_6S0X_032
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GGCUCGUCC
- Length
- 9 nucleotides
- Bulged bases
- 6S0X|1|A|C|1362, 6S0X|1|A|U|1366
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S0X_032 not in the Motif Atlas
- Geometric match to HL_7A0S_041
- Geometric discrepancy: 0.3821
- The information below is about HL_7A0S_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07145.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6S0X|1|A|G|1360
6S0X|1|A|G|1361
6S0X|1|A|C|1362
6S0X|1|A|U|1363
6S0X|1|A|C|1364
6S0X|1|A|G|1365
6S0X|1|A|U|1366
6S0X|1|A|C|1367
6S0X|1|A|C|1368
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L22
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