HL_6S13_011
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GUAAUAAUC
- Length
- 9 nucleotides
- Bulged bases
- 6S13|1|A|A|372, 6S13|1|A|A|373, 6S13|1|A|U|374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S13_011 not in the Motif Atlas
- Homologous match to HL_4WF9_012
- Geometric discrepancy: 0.1558
- The information below is about HL_4WF9_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
6S13|1|A|G|370
6S13|1|A|U|371
6S13|1|A|A|372
6S13|1|A|A|373
6S13|1|A|U|374
6S13|1|A|A|375
6S13|1|A|A|376
6S13|1|A|U|377
6S13|1|A|C|378
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L24
Coloring options: