HL_6SJ6_053

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6SJ6_053 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.5088

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6SJ6|1|A|C|2431
6SJ6|1|A|G|2432
6SJ6|1|A|C|2433
6SJ6|1|A|A|2434
6SJ6|1|A|U|2435
6SJ6|1|A|G|2436
6SJ6|1|A|G|2437
6SJ6|1|A|A|2438
6SJ6|1|A|A|2439
6SJ6|1|A|G|2440

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L15