HL_6T59_029

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

6T59|1|54|C|1676, 6T59|1|54|A|1679

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T59_029 not in the Motif Atlas

Homologous match to HL_8C3A_022

Geometric discrepancy: 0.1092

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6T59|1|54|C|1675
6T59|1|54|C|1676
6T59|1|54|U|1677
6T59|1|54|C|1678
6T59|1|54|A|1679
6T59|1|54|G|1680

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain a3

uL15

Chain b3

eL29

Chain o3

eL42