HL_6T83_072

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

6T83|1|1b|U|3351

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_072 not in the Motif Atlas

Geometric match to HL_5F9R_002

Geometric discrepancy: 0.3909

The information below is about HL_5F9R_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6T83|1|1b|C|3350
6T83|1|1b|U|3351
6T83|1|1b|U|3352
6T83|1|1b|G|3353

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Ib

40S ribosomal protein S8-A