HL_6TBV_019
3D structure
- PDB id
- 6TBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6TBV|1|16S1|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TBV_019 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.0622
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6TBV|1|16S1|G|786
6TBV|1|16S1|A|787
6TBV|1|16S1|U|788
6TBV|1|16S1|U|789
6TBV|1|16S1|A|790
6TBV|1|16S1|G|791
6TBV|1|16S1|A|792
6TBV|1|16S1|U|793
6TBV|1|16S1|A|794
6TBV|1|16S1|C|795
6TBV|1|16S1|C|796
Current chains
- Chain 16S1
- 16S rRNA
Nearby chains
- Chain 23S1
- Large subunit ribosomal RNA; LSU rRNA
- Chain MRN1
- mRNA
- Chain PTR1
- Transfer RNA; tRNA
- Chain S111
- 30S ribosomal protein S11
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