HL_6TC3_050

3D structure

PDB id

6TC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

6TC3|1|23S1|A|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6TC3_050 not in the Motif Atlas

Geometric match to HL_8HNT_002

Geometric discrepancy: 0.3443

The information below is about HL_8HNT_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56676.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

6TC3|1|23S1|C|544
6TC3|1|23S1|U|545
6TC3|1|23S1|U|546
6TC3|1|23S1|A|547
6TC3|1|23S1|G|548
6TC3|1|23S1|G|549

Current chains

Chain 23S1

23S rRNA

Nearby chains

Chain L131

50S ribosomal protein L13