HL_6TNN_046
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UUUAGCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6TNN|1|U|A|1807, 6TNN|1|U|G|1808, 6TNN|1|U|C|1809, 6TNN|1|U|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TNN_046 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1079
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6TNN|1|U|U|1804
6TNN|1|U|U|1805
6TNN|1|U|U|1806
6TNN|1|U|A|1807
6TNN|1|U|G|1808
6TNN|1|U|C|1809
6TNN|1|U|A|1810
6TNN|1|U|A|1811
6TNN|1|U|A|1812
6TNN|1|U|A|1813
6TNN|1|U|A|1814
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain W
- 50S ribosomal protein L2
- Chain r
- 50S ribosomal protein L34
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