HL_6UFG_006

3D structure

PDB id

6UFG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-OH

Experimental method

X-RAY DIFFRACTION

Resolution

2.93 Å

Loop

Sequence

CAGGCGGUUAG

Length

11 nucleotides

Bulged bases

6UFG|1|B|C|17, 6UFG|1|B|G|18, 6UFG|1|B|G|19, 6UFG|1|B|U|20, 6UFG|1|B|U|21

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_23115.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6UFG|1|B|C|13
6UFG|1|B|A|14
6UFG|1|B|G|15
6UFG|1|B|G|16
6UFG|1|B|C|17
6UFG|1|B|G|18
6UFG|1|B|G|19
6UFG|1|B|U|20
6UFG|1|B|U|21
6UFG|1|B|A|22
6UFG|1|B|G|23

Current chains

Chain B

RNA (77-MER)

Nearby chains