Motif HL_88397.1 Version HL_88397.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6UFH_006 | 6UFH | 0.0000 | 4 | tRNA D-loop | B | tRNA | C | 13 | A | 14 | G | 15 | G | 16 | U | 20 | U | 21 | G | 23 | cWW |
| 2 | HL_6UFG_006 | 6UFG | 0.6256 | 4 | tRNA D-loop | B | tRNA | C | 13 | A | 14 | G | 15 | G | 16 | U | 20 | U | 21 | G | 23 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGGCGGUUAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGCGGUUA | 2 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA D-loop (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.63 | Avg 0.31 | Max 0.63
Coloring options: