HL_6UZ7_063

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

6UZ7|1|5|U|1052

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_063 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.1593

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6UZ7|1|5|C|1047
6UZ7|1|5|U|1048
6UZ7|1|5|U|1049
6UZ7|1|5|A|1050
6UZ7|1|5|A|1051
6UZ7|1|5|U|1052
6UZ7|1|5|U|1053
6UZ7|1|5|G|1054

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AD

KLLA0D06941p

Chain AT

KLLA0E23651p

Chain Bb

60S ribosomal protein L29