HL_6UZ7_067

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_067 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.1977

The information below is about HL_8C3A_028

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

6UZ7|1|5|U|1238
6UZ7|1|5|G|1239
6UZ7|1|5|U|1240
6UZ7|1|5|A|1241
6UZ7|1|5|A|1242
6UZ7|1|5|C|1243
6UZ7|1|5|A|1244
6UZ7|1|5|A|1245

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AK

GDPCP

Chain Br

60S acidic ribosomal protein P0