HL_8C3A_028

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

17

Unit IDs

8C3A|1|1|U|1263
8C3A|1|1|G|1264
8C3A|1|1|U|1265
8C3A|1|1|A|1266
8C3A|1|1|A|1267
8C3A|1|1|C|1268
8C3A|1|1|A|1269
8C3A|1|1|A|1270

Current chains

Chain 1

25S

Nearby chains

Chain AN

60S ribosomal protein L40-B