HL_6UZ7_080
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 6UZ7|1|5|C|1815, 6UZ7|1|5|G|1817, 6UZ7|1|5|A|1819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UZ7_080 not in the Motif Atlas
- Homologous match to HL_5TBW_041
- Geometric discrepancy: 0.1103
- The information below is about HL_5TBW_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56817.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6UZ7|1|5|C|1813
6UZ7|1|5|G|1814
6UZ7|1|5|C|1815
6UZ7|1|5|A|1816
6UZ7|1|5|G|1817
6UZ7|1|5|C|1818
6UZ7|1|5|A|1819
6UZ7|1|5|G|1820
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AP
- KLLA0A06336p
- Chain Bj
- Ribosomal protein L37
- Chain Bl
- 60S ribosomal protein L39
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