HL_6UZ7_084

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UCUAAUUAAAA

Length

11 nucleotides

Bulged bases

6UZ7|1|5|A|2107, 6UZ7|1|5|A|2108, 6UZ7|1|5|U|2109, 6UZ7|1|5|A|2113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_084 not in the Motif Atlas

Homologous match to HL_5TBW_046

Geometric discrepancy: 0.1524

The information below is about HL_5TBW_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.6

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

6UZ7|1|5|U|2104
6UZ7|1|5|C|2105
6UZ7|1|5|U|2106
6UZ7|1|5|A|2107
6UZ7|1|5|A|2108
6UZ7|1|5|U|2109
6UZ7|1|5|U|2110
6UZ7|1|5|A|2111
6UZ7|1|5|A|2112
6UZ7|1|5|A|2113
6UZ7|1|5|A|2114

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AA

KLLA0D16027p

Chain Bj

Ribosomal protein L37