HL_6V3A_087
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3A_087 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1925
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6V3A|1|sN1|G|783
6V3A|1|sN1|A|784
6V3A|1|sN1|U|785
6V3A|1|sN1|U|786
6V3A|1|sN1|A|787
6V3A|1|sN1|G|788
6V3A|1|sN1|A|789
6V3A|1|sN1|U|790
6V3A|1|sN1|A|791
6V3A|1|sN1|C|792
6V3A|1|sN1|C|793
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain k
- 30S ribosomal protein S11
- Chain u
- 30S ribosomal protein S21
- Chain v
- Transfer RNA; tRNA
- Chain w
- mRNA
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