HL_6V3D_021

3D structure

PDB id

6V3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3D_021 not in the Motif Atlas

Homologous match to HL_7RQB_022

Geometric discrepancy: 0.3634

The information below is about HL_7RQB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6V3D|1|AN1|G|710
6V3D|1|AN1|G|711
6V3D|1|AN1|U|712
6V3D|1|AN1|A|713
6V3D|1|AN1|A|714
6V3D|1|AN1|C|715
6V3D|1|AN1|A|716
6V3D|1|AN1|C|717

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains