HL_6V3D_070
3D structure
- PDB id
- 6V3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- GAUUAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3D_070 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.2026
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6V3D|1|B|G|83
6V3D|1|B|A|84
6V3D|1|B|U|85
6V3D|1|B|U|86
6V3D|1|B|A|87
6V3D|1|B|C|88
Current chains
- Chain B
- 5s ribosomal RNA
Nearby chains
- Chain AN1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L25
- Chain Y
- 50S ribosomal protein L30
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