HL_6VLZ_044

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CCUAG

Length

5 nucleotides

Bulged bases

6VLZ|1|AA|C|793, 6VLZ|1|AA|A|795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_044 not in the Motif Atlas

Geometric match to HL_5TBW_004

Geometric discrepancy: 0.1921

The information below is about HL_5TBW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6VLZ|1|AA|C|792
6VLZ|1|AA|C|793
6VLZ|1|AA|U|794
6VLZ|1|AA|A|795
6VLZ|1|AA|G|796

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial