HL_6W6K_017

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

6W6K|1|A|U|793

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6K_017 not in the Motif Atlas

Homologous match to HL_5J7L_017

Geometric discrepancy: 0.2915

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6W6K|1|A|G|786
6W6K|1|A|A|787
6W6K|1|A|U|788
6W6K|1|A|U|789
6W6K|1|A|A|790
6W6K|1|A|G|791
6W6K|1|A|A|792
6W6K|1|A|U|793
6W6K|1|A|A|794
6W6K|1|A|C|795
6W6K|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11