HL_6W6L_003
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 6W6L|1|D|U|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_003 not in the Motif Atlas
- Homologous match to HL_5TBW_075
- Geometric discrepancy: 0.2688
- The information below is about HL_5TBW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6W6L|1|D|C|107
6W6L|1|D|A|108
6W6L|1|D|C|109
6W6L|1|D|U|110
6W6L|1|D|U|111
6W6L|1|D|G|112
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L23a
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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