HL_6W6L_069
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 6W6L|1|t|U|4316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_069 not in the Motif Atlas
- Geometric match to HL_4V83_139
- Geometric discrepancy: 0.3115
- The information below is about HL_4V83_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
6W6L|1|t|U|4314
6W6L|1|t|U|4315
6W6L|1|t|U|4316
6W6L|1|t|G|4317
6W6L|1|t|G|4318
6W6L|1|t|G|4319
6W6L|1|t|U|4320
6W6L|1|t|U|4321
6W6L|1|t|U|4322
6W6L|1|t|U|4323
6W6L|1|t|A|4324
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain b
- 60S ribosomal protein L27a
- Chain j
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L36a
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