HL_6W6P_014

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6W6P|1|A|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_014 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1145

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6W6P|1|A|G|450
6W6P|1|A|G|451
6W6P|1|A|A|452
6W6P|1|A|C|453
6W6P|1|A|C|454
6W6P|1|A|A|455
6W6P|1|A|U|456
6W6P|1|A|C|457

Current chains

Chain A

23S rRNA

Nearby chains