HL_6W6P_091

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

6W6P|1|a|G|987

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_091 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.1362

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97521.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6W6P|1|a|G|979
6W6P|1|a|A|980
6W6P|1|a|A|981
6W6P|1|a|G|982
6W6P|1|a|C|983
6W6P|1|a|A|984
6W6P|1|a|A|985
6W6P|1|a|C|986
6W6P|1|a|G|987
6W6P|1|a|C|988

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10