HL_6W6P_095

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6W6P|1|a|G|1110

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_095 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1616

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.3

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

6W6P|1|a|G|1105
6W6P|1|a|U|1106
6W6P|1|a|U|1107
6W6P|1|a|A|1108
6W6P|1|a|A|1109
6W6P|1|a|G|1110
6W6P|1|a|U|1111
6W6P|1|a|C|1112

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7