3D structure

PDB id
6W77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Inactivated-high-Mg2+ Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6W77_015 not in the Motif Atlas
Homologous match to HL_6CZR_086
Geometric discrepancy: 0.1944
The information below is about HL_6CZR_086
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.4
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
13

Unit IDs

6W77|1|A|C|689
6W77|1|A|G|690
6W77|1|A|G|691
6W77|1|A|U|692
6W77|1|A|G|693
6W77|1|A|A|694
6W77|1|A|A|695
6W77|1|A|A|696
6W77|1|A|U|697
6W77|1|A|G|698

Current chains

Chain A
RNA (1519-MER)

Nearby chains

Chain K
30S ribosomal protein S11

Coloring options:


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