HL_6W77_018

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6W77|1|A|U|842, 6W77|1|A|G|844, 6W77|1|A|A|845

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W77_018 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3306

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6W77|1|A|C|840
6W77|1|A|C|841
6W77|1|A|U|842
6W77|1|A|U|843
6W77|1|A|G|844
6W77|1|A|A|845
6W77|1|A|G|846

Current chains

Chain A

RNA (1519-MER)

Nearby chains

Chain R

30S ribosomal protein S18