HL_6W77_021

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUGCAACGC

Length

10 nucleotides

Bulged bases

6W77|1|A|A|968, 6W77|1|A|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W77_021 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.3013

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97521.1

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6W77|1|A|G|963
6W77|1|A|A|964
6W77|1|A|U|965
6W77|1|A|G|966
6W77|1|A|C|967
6W77|1|A|A|968
6W77|1|A|A|969
6W77|1|A|C|970
6W77|1|A|G|971
6W77|1|A|C|972

Current chains

Chain A

RNA (1519-MER)

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain M

30S ribosomal protein S13