3D structure

PDB id
6W77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Inactivated-high-Mg2+ Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGUCCGGCC
Length
9 nucleotides
Bulged bases
6W77|1|A|C|1136
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6W77_026 not in the Motif Atlas
Geometric match to HL_6CF2_001
Geometric discrepancy: 0.2773
The information below is about HL_6CF2_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87553.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

6W77|1|A|G|1133
6W77|1|A|G|1134
6W77|1|A|U|1135
6W77|1|A|C|1136
6W77|1|A|C|1137
6W77|1|A|G|1138
6W77|1|A|G|1139
6W77|1|A|C|1140
6W77|1|A|C|1141

Current chains

Chain A
RNA (1519-MER)

Nearby chains

Chain I
30S ribosomal protein S9

Coloring options:


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