HL_6WD3_107
3D structure
- PDB id
- 6WD3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WD3_107 not in the Motif Atlas
- Homologous match to HL_6UFM_002
- Geometric discrepancy: 0.4116
- The information below is about HL_6UFM_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
6WD3|1|6|G|31
6WD3|1|6|C|32
6WD3|1|6|U|33
6WD3|1|6|C|34
6WD3|1|6|A|35
6WD3|1|6|U|36
6WD3|1|6|A|37
6WD3|1|6|A|38
6WD3|1|6|C|39
Current chains
- Chain 6
- tRNAfMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain L
- 30S ribosomal protein S7
- Chain P
- 30S ribosomal protein S11
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