HL_6WDG_103
3D structure
- PDB id
- 6WDG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGCUCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDG_103 not in the Motif Atlas
- Homologous match to HL_6GSK_218
- Geometric discrepancy: 0.353
- The information below is about HL_6GSK_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6WDG|1|5|G|30
6WDG|1|5|G|31
6WDG|1|5|C|32
6WDG|1|5|U|33
6WDG|1|5|C|34
6WDG|1|5|A|35
6WDG|1|5|U|36
6WDG|1|5|A|37
6WDG|1|5|A|38
6WDG|1|5|C|39
6WDG|1|5|C|40
Current chains
- Chain 5
- tRNAfMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain N
- 30S ribosomal protein S9
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