HL_6WLU_050

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCAUAU

Length

6 nucleotides

Bulged bases

6WLU|10|A|A|189, 6WLU|10|A|A|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLU_050 not in the Motif Atlas

Geometric match to HL_8OI5_012

Geometric discrepancy: 0.3731

The information below is about HL_8OI5_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

6WLU|10|A|G|187
6WLU|10|A|C|188
6WLU|10|A|A|189
6WLU|10|A|U|190
6WLU|10|A|A|191
6WLU|10|A|U|192

Current chains

Chain A

RNA (231-MER)

Nearby chains