HL_6WRU_073

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCACGUGAAAU

Length

11 nucleotides

Bulged bases

6WRU|1|1|G|432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_073 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1901

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6WRU|1|1|G|428
6WRU|1|1|C|429
6WRU|1|1|A|430
6WRU|1|1|C|431
6WRU|1|1|G|432
6WRU|1|1|U|433
6WRU|1|1|G|434
6WRU|1|1|A|435
6WRU|1|1|A|436
6WRU|1|1|A|437
6WRU|1|1|U|438

Current chains

Chain 1

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L28