HL_6XA1_053
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 6XA1|1|L5|U|3781
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XA1_053 not in the Motif Atlas
- Homologous match to HL_5TBW_050
- Geometric discrepancy: 0.0855
- The information below is about HL_5TBW_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
6XA1|1|L5|U|3775
6XA1|1|L5|C|3776
6XA1|1|L5|U|3777
6XA1|1|L5|A|3778
6XA1|1|L5|A|3779
6XA1|1|L5|U|3780
6XA1|1|L5|U|3781
6XA1|1|L5|A|3782
6XA1|1|L5|G|3783
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LV
- 60S ribosomal protein L23
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain j
- Eukaryotic peptide chain release factor subunit 1
Coloring options: