HL_6XIQ_045
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GGUAC
- Length
- 5 nucleotides
- Bulged bases
- 6XIQ|1|1|G|2111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XIQ_045 not in the Motif Atlas
- Homologous match to HL_8C3A_045
- Geometric discrepancy: 0.248
- The information below is about HL_8C3A_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6XIQ|1|1|G|2110
6XIQ|1|1|G|2111
6XIQ|1|1|U|2112
6XIQ|1|1|A|2113
6XIQ|1|1|C|2114
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain W
- RPL24A isoform 1
Coloring options: