HL_6XZA_031

3D structure

PDB id

6XZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6XZA|1|A1|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XZA_031 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.1097

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

6XZA|1|A1|C|1449
6XZA|1|A1|U|1450
6XZA|1|A1|U|1451
6XZA|1|A1|C|1452
6XZA|1|A1|G|1453
6XZA|1|A1|G|1454

Current chains

Chain A1

16S rRNA

Nearby chains